Posts

Modeling single cell RNAseq data with multinomial distribution

negative bionomial distribution in (single-cell) RNAseq

negative binomial distribution

My opinionated selection of books/urls for bioinformatics/data science curriculum

Develop Bioconductor packages with docker container

Run Rstudio server with singularity on HPC

Calculate scATACseq TSS enrichment score

clustering scATACseq data: the TF-IDF way

plot 10x scATAC coverage by cluster/group

Use docopt to write command line R utilities