Format
Seurat object (RDS)
A serialized Seurat object; contents depend on the Seurat version that wrote it, and v5 layers (counts, data, scale.data) are where conversions break.
Extensions: .rds, .RDS · Coordinates: n/a · Specification
From Seurat object (RDS)
No conversions from this format yet.
To Seurat object (RDS)
- How to Convert h5ad to Seurat object (Without Losing Your Metadata)
anndataR and capseuratconverter handle the transpose and slot mapping for you; deciding which layer actually becomes your counts slot is still on you.