Format
10x MTX (Matrix Market)
Cell Ranger's three-file sparse output: the coordinate-format matrix plus features and barcodes. Genes are rows, cells are columns.
Extensions: matrix.mtx.gz, features.tsv.gz, barcodes.tsv.gz · Coordinates: n/a · Specification
From 10x MTX (Matrix Market)
- How to Convert 10x MTX to Seurat object (and Why IDs Go Missing)
Read10X reads a directory, not a file, and the column you pick for gene names quietly decides how many genes you actually have.
To 10x MTX (Matrix Market)
No conversions to this format yet.