https://divingintogeneticsandgenomics.com/tags/ipython-notebook/ Recent content in Ipython notebook on Chatomics Hugo -- gohugo.io en-us © 2018 Ming 'Tommy' Tang Mon, 04 May 2015 20:48:00 -0700 https://divingintogeneticsandgenomics.com/archive/ibash-notebook-for-reproducible-research/ Mon, 04 May 2015 20:48:00 -0700 https://divingintogeneticsandgenomics.com/archive/ibash-notebook-for-reproducible-research/ I use command line a lot. It is awesome for data processing, text data formatting and even exploratory data analysis. Last week, one of my colleagues complained that she forgot how she got the data and processed the data. With a future "ME" in mind, one needs to do extensive documentations of where, when and how you download and process the data, and document the versions of the tools used in the analysis.