ChIP-seq

I just came across UCSC genome browser in a box Gbib, and I want to try it out.

I passed my defense on Tuesday, and now I am a PhD! what a long process, it took me six years. I’ve been enjoying the PhD experience though.

First, you need to get an idea of what is a bigwig file:

Someone was asking this question on Seqanswers

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I was reading a cell paper:

This is the first blog in the year of 2014. I am graduating in the coming August, there are so many things to do and I do not have much time to blog.…

The question is straightforward:

Continue with my last post GEOquery to access GEO datasets, I am going to analyze the Tet1 ChIP-seq data in the paper Dual functions of Tet1 in…

I want to find SNPs occur at the transcription binding sites which may potentially affect the binding of the transcription factor.