Bowtie

remap the Eland sorted.txt file from hg18 to hg19

Sometime ago, I wrote a blog about how to convert Eland sorted.txt file to bam file\ convert Eland sorted.txt to bam file

SRA file and my first Bowtie run on UF HPC (high performance computing center)

I wanted to have a look at a certain ChIP-seq data in MCF7 breast cancer cells.