Bed

get the peaks that shared in multiple samples

get the peaks that shared in multiple samples

read in all the files in a folder to R

see a post\ I downloaded some broadpeak data from UCSC and put them in a folder /Users/mtang1/projects/ENCODE_ChIPseq/data/\ I cut only first four columns…

Using Awk to join two files based on several columns

I was reading a thread on stackoverflow and found that this post was very interesting. I will go through the problem and the awk solution. Again, Awk is…

how to get a genome-wide motif bed file

Someone was asking this question on Seqanswers