https://divingintogeneticsandgenomics.com/tags/alternative-splicing/ Recent content in Alternative splicing on Chatomics Hugo -- gohugo.io en-us © 2018 Ming 'Tommy' Tang Mon, 17 Jun 2013 08:57:00 -0700 https://divingintogeneticsandgenomics.com/archive/sashimi-plot-for-rna-seq-data/ Mon, 17 Jun 2013 08:57:00 -0700 https://divingintogeneticsandgenomics.com/archive/sashimi-plot-for-rna-seq-data/ It is a python package for visualizing the RNA-seq data. sashimi_plot is a utility for automatically producing publication-quality plots for RNA-Seq analyses of isoform expression. It is part of the MISOframework. In particular, sashimi_plot can: (1) plot raw RNA-Seq densities along exons and junctions for multiple samples, while simultaneously visualizing the gene model/isoforms to which reads map, and (2) plot MISO output alongside the raw data or separately. The MISO framework is described in Katz et.